#include <precursor.h>

Public Member Functions
void	fromCbor (CborStreamReader &reader)
QJsonObject	toJsonObject () const
	write the structure to a JSON object

Public Attributes
QString	spectrumRef
IsolationWindow	isolationWindow
CvParamMap	selectedIonListCvParamMap
std::vector< SelectedIon >	selectedIonList

Detailed Description

Todo: write docs

Definition at line 82 of file precursor.h.

Member Function Documentation

◆ fromCbor()

void pappso::cbor::mzcbor::Precursor::fromCbor ( CborStreamReader & reader )

Definition at line 221 of file precursor.cpp.

{
 
  QString txt_value;
  reader.enterContainer();
  qDebug() << txt_value;
  while(reader.hasNext() && (!reader.isInvalid()))
    {
      if(reader.isString())
        {
          if(reader.decodeString(txt_value))
            {
              qDebug() << txt_value;
              if(txt_value == "cvParam")
                {
                  // precursorListCvParamMap = CvParam::getCvParamsMapFromCbor(reader);
                  reader.next();
                }
              else if(txt_value == "isolationWindow")
                {
                  isolationWindow.fromCbor(reader);
                }
              else if(txt_value == "selectedIonList")
                {
 
                  reader.enterContainer();
 
                  while(reader.hasNext() && (!reader.isInvalid()))
                    {
                      if(reader.isString())
                        {
                          if(reader.decodeString(txt_value))
                            {
                              qDebug() << txt_value;
                              if(txt_value == "cvParam")
                                {
                                  selectedIonListCvParamMap.fromCbor(reader);
                                }
                              else if(txt_value == "selectedIon")
                                {
 
                                  reader.enterContainer(); // array
 
                                  while(reader.hasNext() && (!reader.isInvalid()))
                                    {
                                      SelectedIon selected_ion;
                                      selected_ion.fromCbor(reader);
                                      selectedIonList.emplace_back(selected_ion);
                                    }
                                  reader.leaveContainer(); // array
                                }
                              else
                                {
                                  reader.next();
                                }
                            }
                          else
                            {
                              reader.next();
                            }
                        }
                      else
                        {
                          reader.next();
                        }
                    }
                  reader.leaveContainer();
                }
              else if(txt_value == "activation")
                {
                  qDebug();
                  reader.next();
                }
 
              else if(txt_value == "spectrumRef")
                {
                  reader.decodeString(txt_value);
                  qDebug() << txt_value;
                  spectrumRef = txt_value;
                }
              else
                {
                  reader.next();
                }
            }
          else
            {
              reader.next();
            }
        }
      else
        {
          reader.next();
        }
    }
  reader.leaveContainer();
}

References pappso::cbor::CborStreamReader::decodeString(), pappso::cbor::mzcbor::SelectedIon::fromCbor(), isolationWindow, selectedIonList, selectedIonListCvParamMap, and spectrumRef.

Referenced by pappso::cbor::mzcbor::Spectrum::fromCbor().

◆ toJsonObject()

QJsonObject pappso::cbor::mzcbor::Precursor::toJsonObject ( ) const

write the structure to a JSON object

Returns: QJsonObject

Definition at line 107 of file precursor.cpp.

{
  QJsonObject precursor;
  if(!spectrumRef.isEmpty())
    precursor.insert("spectrumRef", spectrumRef);
  precursor.insert("isolationWindow", isolationWindow.toJsonObject());
  return precursor;
}

References isolationWindow, and spectrumRef.

Member Data Documentation

◆ isolationWindow

IsolationWindow pappso::cbor::mzcbor::Precursor::isolationWindow

Definition at line 93 of file precursor.h.

Referenced by fromCbor(), and toJsonObject().

◆ selectedIonList

std::vector<SelectedIon> pappso::cbor::mzcbor::Precursor::selectedIonList

Definition at line 97 of file precursor.h.

Referenced by fromCbor().

◆ selectedIonListCvParamMap

CvParamMap pappso::cbor::mzcbor::Precursor::selectedIonListCvParamMap

Definition at line 95 of file precursor.h.

Referenced by fromCbor().

◆ spectrumRef

QString pappso::cbor::mzcbor::Precursor::spectrumRef

Definition at line 91 of file precursor.h.