interleaved_bloom_filter.hpp File Reference

Provides seqan3::interleaved_bloom_filter. More...

#include <algorithm>
#include <bit>
#include <sdsl/bit_vectors.hpp>
#include <seqan3/core/concept/cereal.hpp>
#include <seqan3/core/detail/strong_type.hpp>

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Classes
struct	seqan3::bin_count
	A strong type that represents the number of bins for the seqan3::interleaved_bloom_filter. More...
struct	seqan3::bin_index
	A strong type that represents the bin index for the seqan3::interleaved_bloom_filter. More...
struct	seqan3::bin_size
	A strong type that represents the number of bits for each bin in the seqan3::interleaved_bloom_filter. More...
class	seqan3::interleaved_bloom_filter< data_layout_mode_ >::membership_agent_type::binning_bitvector
	A bitvector representing the result of a call to bulk_contains of the seqan3::interleaved_bloom_filter. More...
class	seqan3::interleaved_bloom_filter< data_layout_mode_ >::counting_agent_type< value_t >
	Manages counting ranges of values for the seqan3::interleaved_bloom_filter. More...
class	seqan3::counting_vector< value_t >
	A data structure that behaves like a std::vector and can be used to consolidate the results of multiple calls to seqan3::interleaved_bloom_filter::membership_agent_type::bulk_contains. More...
struct	seqan3::hash_function_count
	A strong type that represents the number of hash functions for the seqan3::interleaved_bloom_filter. More...
class	seqan3::interleaved_bloom_filter< data_layout_mode_ >
	The IBF binning directory. A data structure that efficiently answers set-membership queries for multiple bins. More...
class	seqan3::interleaved_bloom_filter< data_layout_mode_ >::membership_agent_type
	Manages membership queries for the seqan3::interleaved_bloom_filter. More...

Namespaces
namespace	seqan3
	The main SeqAn3 namespace.

Enumerations
enum	seqan3::data_layout : bool { seqan3::uncompressed , seqan3::compressed }
	Determines if the Interleaved Bloom Filter is compressed. More...

Detailed Description

Provides seqan3::interleaved_bloom_filter.

Author

Enrico Seiler <enrico.seiler AT fu-berlin.de>